Bioinformatics Engineer

OverviewBioinformatics EngineerEngineeringSan Francisco, CA, USPay rate: $40/ hr - $50/ hrLocation: Remote but must be able to work in PST time zoneJob Type: 6-month contractKey ResponsibilitiesProcess & analyze high-throughput sequencing data from various platformsTest bioinformatics software, pipelines and workflows with different parameterizations and compare resultsPackage bioinformatics software, pipelines and workflows for distribution through Bioconda and container repositoriesWrite CI/CD Github Actions tasks for automated unit test running, compile time benchmarking, performance regression checkingDevelop frontend data visualization components for proteomics and multiome dataPrepare bioinformatics data web apps (made with Dash, Shiny, Streamlit) for deployment on productQualificationsBachelors or Masters in Computer Science, Bioinformatics, Computational Biology or related field with 2 years of biotech/academia/research experienceProficient in a GNU/Linux command line interface and Python, JavaScriptExperience with High Performance Computing Clusters (HPC) and job schedulersExperience with bioinformatics workflow management frameworks (Snakemake, Nextflow)CI/CD experienceExperience with front end developmentNice to HavesExperience with JS frameworks: React, Next.js, Node.js, D3.js, TailwindExperience with AnnData formatExperience with VCF (variant call format)We are an equal opportunity employer and all qualified applicants will receive consideration for employment without regard to race, color, religion, sex, national origin, disability status, protected veteran status, or any other characteristic protected by law. #J-18808-Ljbffr

Created: 2025-09-17